Osquery was not working with Fleet after deployment due to wrong directories.
The following command installs the osqueryd service with --flagfile=\ProgramData\osquery\osquery.flags" however osquery.flags found at "C:\Program Files\osquery\osquery.flags"
``` "c:\Program Files\osquery\osqueryd\osqueryd.exe" -ArgumentList "--install" -Wait
```
The original osquery.flags defines the certfile.crt to be in "C:\programdata\osquery", it should be in "c:\Program Files\osquery\" instead.